Package 'somaticflags'

Title: Database of Somatic Flags
Description: Database of genes which frequently sustain somatic mutations, but are unlikely to drive cancer.
Authors: Sam El-Kamand [aut, cre] (ORCID: <https://orcid.org/0000-0003-2270-8088>), Children's Cancer Institute Australia [cph]
Maintainer: Sam El-Kamand <[email protected]>
License: MIT + file LICENSE
Version: 0.1.0
Built: 2026-05-27 10:40:15 UTC
Source: https://github.com/CCICB/somaticflags

Help Index

Somatic Flags Dataset

Description

a list of genes which are frequently mutated in somatic cancer datasets but are unlikely to drive disease.

Usage

somaticflags

Format

A vector with 139 gene names:

Source

doi:10.1038/nature12213 and doi:10.1186/s12920-014-0064-y

Examples

data(somaticflags)
head(somaticflags)

Somatic Flags Dataset

Description

a list of genes which are frequently mutated in somatic cancer datasets but are unlikely to drive disease.

Usage

somaticflags_df

Format

A data.frame with 139 gene names:

Gene

Genes frequently mutated in somatic cancer datasets but that are unlikely to drive disease

Source

Supporting papers for the gene being a somatic flag

Reason

Explanation for the gene being considered a somatic flag

...

Source

doi:10.1038/nature12213 and doi:10.1186/s12920-014-0064-y

Examples

data(somaticflags_df)
head(somaticflags_df)